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Surgical Neuropathology of Non-neoplastic CNS Disorders
Moderators: Teresa Ribalta and Gerard H. Jansen
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Section 2 -
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Non-neoplastic Cysts

Teresa Ribalta
Hospital Clinic, University of Barcelona
Barcelona, Spain
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A wide variety of non-neoplastic cystic lesions occur in the central nervous system (CNS), some of
which are incidental and others, symptomatic. Advances in diagnostic neuroimaging have facilitated
diagnosis and surgical intervention for patients with CNS cysts. Many of these lesions are currently
removed and submitted for evaluation. Only some cystic cavities are epithelium-lined, thus qualifying
them as "true" cysts. An embryological origin has been proposed for most of these lesions, although
controversy still exists about the precise etiology of some of them. Classifications and terminology
schemes used by pathologists, neurosurgeons, and neuroradiologists have been varied and numerous, leading
to some nosologic confusion, in part because cystic lesions are not always phenotypically classical; it
is likely that they exist as a spectrum. The most helpful elements for the histopathological diagnosis
of a non-neoplastic CNS cyst are anatomic location and type of wall lining (see Table). However,
accurate histological characterization of the cyst is not infrequently limited by small specimen size or
lack of adequate specimen preservation. Histochemical and immunohistochemical markers may be helpful
ancillary techniques in identifying the precise nature of the cyst wall elements. Non-neoplastic cysts
must be distinguished from cystic CNS neoplasms with a diminutive solid component (e.g., pilocytic
astrocytoma and other cystic gliomas, hemangioblastoma, ganglioglioma, etc.), cavities arising from
infarcts and other destructive processes, and cystic lesions of an infectious nature.

Arachnoid Cyst
Arachnoid or leptomeningeal cysts are congenital lesions that arise during development from a
splitting of the arachnoid membrane. This splitting results in the formation of a cystic space
containing a fluid similar to cerebrospinal fluid (CSF) that does not communicate with the ventricular
system or the subarachnoid space. They may occur anywhere in the CNS where arachnoid is found, usually
in association with the normal arachnoid cisterns, but most commonly in the middle cranial fossa and the
suprasellar cistern. Arachnoid cysts are currently regarded as a developmental abnormality of the
arachnoid and have been reported in association with various congenital abnormalities. A possible
genetic origin is suspected in some cases. Arachnoid cysts are most often identified as incidental
findings on imaging studies performed for other reasons, because these cysts usually do not produce
symptoms even when quite large. Some cases have been diagnosed by antenatal or postnatal ultrasound
examinations. Imaging studies show a smooth-bordered, non-enhancing cystic mass with signal
characteristics similar to CSF. Current surgical treatment procedures for symptomatic cysts include, at
most, partial resection of the cyst wall.

Macroscopically, the intact cyst (as is seen only in situ in the
operating room or at autopsy) typically shows a transparent, smooth wall and a cavity filled with clear
colorless CSF-like fluid. The deep aspect of the cyst shows displaced, but otherwise normal, brain or
spinal cord. Histological examination of intact complete specimens shows that the cyst is located within
a split of the arachnoid membrane. It may be unilocular or loculated by septations. Multiple lesions
are common in the spinal cord. The surgical specimen submitted for diagnosis is usually limited to a
small portion of the outer leaflet of the cyst wall. The specimen consists of a delicate membrane of
connective tissue, thicker than normal arachnoid but thinner than dura. No epithelial lining is
observed; rather, there is usually a layer of flattened arachnoid cells or small nests of arachnoid cells
present on the inner surface of the wall. As would be expected, the lining cells are immunoreactive for
epithelial membrane antigen (EMA) and progesterone receptors, and negative for glial fibrillary acidic
protein (GFAP), S-100 protein, transthyretin (prealbumin), and carcinoembryonic antigen (CEA). This
immunophenotypic profile knowledge can be helpful in distinguishing arachnoid cysts from single ependymal
and epithelial cysts in cases in which a diagnosis is difficult to make using only routine stains.

There are a number of entities in the differential diagnosis of arachnoid cyst. True arachnoid cysts
must be differentiated from acquired arachnoid cysts (leptomeningeal cysts) caused by arachnoid adhesions
secondary to surgery, trauma, subarachnoid hemorrhage, or infection. The presence of
hemosiderin-containing macrophages and other chronic inflammatory features in the cyst wall should be
regarded as favoring a posthemorrhagic or postmeningitic leptomeningeal cyst. Arachnoid cysts can indent
deeply into the hemisphere, simulating porencephaly. However, porencephalic cysts communicate with the
ventricles, are surrounded by abnormal cortex, and follow a vascular distribution. Chronic subdural
hygromas usually are located subdurally, rather than in the subarachnoid space, and often are bilateral
and flat or lentiform in profile. Spinal epidural cysts, which connect with the subarachnoid space
through the dura via a thin stalk, are not considered true arachnoid cysts, but rather as arachnoidal
tissue herniations or diverticula. Dural cysts are cystically dilated intradural clefts that rarely
cause compression of the adjacent structures.

Epidermoid and Dermoid Cysts
These are the two major variants of ectodermally derived CNS cysts, and both are lined by keratinizing
stratified squamous epithelium. Most of these lesions are presumed to arise from ectopic ectoderm
tissues, displaced into the CNS at the time of neural tube closure. These cysts may also arise, at any
age, secondary to a traumatic or iatrogenic implantation that drives skin elements into the underlying
CNS tissues. Complete surgical excision is curative for both lesions. Rupture of the cyst wall with
leakage of the contents into the CSF produces a severe chemical meningitis. Malignant transformation to
squamous cell carcinoma can occur but is exceptionally rare.

Epidermoid cysts are unilocular, thin-walled cysts with a characteristic glistening pearl-like sheen
("pearly tumor"). The cyst contents consist of white, flaky material on gross examination. Like the
epidermal inclusion cysts that occur at extra-CNS sites, the lining is composed of multiple layers of
keratinized squamous epithelial cells supported by a delicate connective tissue capsule. A granular cell
layer is invariably present, although it may be inconspicuous in areas of attenuated epithelium. The
cyst cavity is filled with flattened sheets of anucleate squames. Despite their developmental origin,
intracranial epidermoid cysts rarely present before the third decade of life, and most lesions are
incidentally found. The cysts have a wide anatomic distribution along the neuraxis, but most develop
eccentrically in the region of the cerebellopontine angle. In this location, they are often referred to
as cholesteatomas; however, they are quite distinct from the acquired cholesteatomas of the middle ear,
which result from local chronic infection. Other locations include the suprasellar region, the
ventricles, the thalamus, the brainstem and the spinal meninges. For those epidermoid cysts arising in
the suprasellar region, the differential diagnosis includes Rathke cyst with extensive squamous
metaplasia, and craniopharyngioma. The advanced degree of keratinization, formation of cytoplasmic
keratohyaline granules, and complete lack of mucous-secreting cells are characteristic features of the
epidermoid cyst that are generally foreign to other cystic lesions.

Dermoid cysts tend to present in childhood or adolescence and typically occur in the
midline, in the posterior cranial fossa, or in a fontanelle. In the spinal cord, dermoid cysts
predominate in the lumbosacral region and can be part of a dysraphic malformation. A sinus tract may
connect a dermoid cyst to the skin. In comparison with epidermoids, dermoid cysts have a thicker wall
and contain unpleasant, cheesy pilosebaceous material. By definition, the cyst wall is endowed with skin
appendages, including sweat glands and pilosebaceous units. Squamous cells with keratohyaline granules
are not seen in dermoid cysts. The intraluminal keratin may contain cell ghosts that are reminiscent of
the "wet keratin" of adamantinomatous craniopharyngioma and are attributed to hair matrix
differentiation. However, dermoid (and epidermoid) cysts have a less complex architecture than
adamantinomatous craniopharyngioma and lack the peripheral palisading and internal stellate reticulum
that characterize the epithelial nodules of this tumor. The presence of endodermal glandular elements,
muscle, or cartilage should alert suspicion for a mature cystic teratoma, especially in the pineal and
suprasellar regions.

Ependymal Cysts
Ependymal cysts, also named neuroepithelial or glioependymal cysts, are uncommon lesions that tend to
develop in relation to the cerebral ventricles and paraventricular white matter, and only very rarely
occur in the fourth ventricle or in extra-axial sites. A maldevelopmental origin is likely for all of
these lesions.

The cysts contain a watery fluid and are lined by a row of columnar or cuboidal, often ciliated,
ependymal-like cells that rest directly on fibrillary neuroglial tissue. Pseudostratification,
mucin-producing cells, and basement membrane are not features of ependymal cysts. Their neuroepithelial
nature is supported by the immunoreactivity of the lining for S-100 protein and sometimes GFAP, and a
lack of reactivity for EMA, CEA, and transthyretin. This immunohistochemical profile allows their
distinction from colloid cysts, cysts of endodermal origin, and choroid plexus cysts. By electron
microscopy, the neuroepithelial lining also exhibits typical features of ependymal epithelium, such as
cytoplasmic glial filaments, intercellular junctions, apical microvilli, and often cilia, as well.

Enterogenous and Bronchogenic Cysts
These uncommon lesions are typically intradural and usually located anterior to the spinal cord.
Enterogenous and bronchogenic cysts, also known as neurenteric and respiratory epithelial cysts,
respectively, probably result from the incomplete separation of developing endodermal and notochordal
tissues in early embryonic life. These endodermal lesions may be associated with vertebral anomalies,
spinal dysraphism, intestinal malformations and similar cysts in the thoracic and abdominal cavities.
Histologically similar intracranial lesions occasionally arising in the anterior fossa may be of
ectodermal derivation.

Grossly, the lesion is an opalescent, smooth-surfaced, fluid-filled cyst. Microscopically, the inner
layer is a pseudostratified columnar epithelium, with or without cilia and goblet cells, which rests upon
a periodic acid-Schiff (PAS)-positive basement membrane. The epithelial lining reacts with antibodies to
CK, EMA and CEA, and is negative for S-100 protein and GFAP. A similar lining is seen in Rathke cysts
and colloid cysts of the third ventricle. Occasional variants include seromucinous glands, smooth muscle
fascicles, hyaline cartilage, and other elements of the developed digestive or respiratory tract within
the cyst wall. The additional presence of glial cells or ectodermal elements should elicit a diagnosis
of cystic teratoma.

Colloid Cyst of the Third Ventricle
The distinctive location and morphology of the colloid cyst of the third ventricle make it a clear-cut
pathologic entity. Colloid cysts characteristically arise in the rostral roof of the third ventricle
near the foramen of Monro and between the columns of the fornices. Symptomatic lesions, most measuring 1
cm or larger, usually present in adults with headaches and manifestations of ventricular outflow
obstruction that can be intermittent, probably due to a positional "ball-valve" effect at the foramen of
Monro. Surgical removal of the entire cyst is curative.

Colloid cysts are grossly unilocular, thin-walled, and filled with a viscous, mucoid material.
Although it would be natural to consider this lesion a variant of the ependymal cyst, morphological,
immunohistochemical and ultrastructural features speak convincingly for an endodermal derivation. The
cyst lining is ciliated, pseudostratified columnar epithelium with scattered goblet cells, but a simpler,
low cuboidal epithelial layer may be seen as a result of intraluminal pressure. The morphological
resemblance of the colloid cyst lining to respiratory epithelium is reinforced by the expression in many
cases (but not invariably) of CK, EMA and CEA, and lack of reactivity for GFAP and transthyretin
(prealbumin). The cyst content is PAS-positive and frequently includes characteristic filamentous,
hyphae-like aggregates of degenerated nucleoproteins and phospholipids, which may be of diagnostic
interest in the absence of identifiable epithelium. Adherent choroid plexus is frequently seen in the
outer surface of the delicate fibrous capsule. Rupture of the cyst wall induces a florid
xanthogranulomatous inflammatory reaction that in some cases largely replaces the epithelium. In the
absence of an epithelial lining, distinction from other lesions with xanthomatous changes occurring in
this anatomic region, such as craniopharyngioma or the so-called "xanthogranuloma of the third
ventricle", may be difficult if not impossible; the nature of some of these lesions is not clear.

Rathke Cleft Cyst
The pars intermedia of the pituitary gland normally contain multiple small cystic remnants of the
embryonic pharyngeal epithelial pouch (Rathke's pouch). These microscopic cysts rarely grow large enough
to compress the pituitary and become symptomatic. The Rathke's cyst lining has a striking resemblance to
that of the colloid cyst and the enterogenous cyst. Like them, Rathke's cyst may also contain squamous
metaplastic elements, and in these cases, distinguishing Rathke's cyst from craniopharyngioma may be
difficult. Calcification, keratin nodules, and chronic inflammation are more common in
craniopharyngioma. Recently, a differential cytokeratin expression profile has been shown between Rathke
cleft cysts, which express CK 8 and 20, and craniopharyngioma (all variants), which don't. This
difference could be of diagnostic utility when only a small biopsy is available.

Pineal gland cyst
The normal pineal gland contains small fluid-filled cavities that are frequently found at
postmortem examination and may be conspicuous on neuroimaging. These cavities probably result from
degenerative changes in the pineal gland and rarely reach sufficient size to compress adjacent
structures. On microscopic study, an adequate specimen for diagnosis should include the typical cyst
wall, consisting of an inner gliotic layer with profuse numbers of Rosenthal fibers, scattered
eosinophilic granular bodies, and focal hemosiderin deposition, remnants of pineal parenchyma in the
middle, and an external fibrous capsule. Pineal parenchymal tumors are nearly always solid masses and
are rarely cystic tumors.

Choroid plexus cyst
This is another typically small and asymptomatic lesion that is often discovered
incidentally, most frequently in the glomus of the lateral ventricles. This cyst contains CSF, and the
wall is composed of a thin fibrous membrane with an inner layer of cuboidal choroidal plexus
neuroepithelial cells. The differential diagnosis of an intraventricular cyst includes ependymal cyst,
colloid cyst, arachnoid cyst, Rathke's cleft cyst, and cysticercosis. Both the morphology of the inner
lining and immunohistochemistry are necessary for differentiating between these types of cysts. A
positive immunoreaction to transthyretin confirms the origin of an ventricular cyst as arising from
choroid plexus epithelium.
Table. Synonyms, Principal Locations and Diagnostic Features of Non-Neoplastic Cysts of the CNS
| | Synonyms | Anatomic Location | Luminal Content | Inner Wall | Outer wall | Useful IHC Markers |
| Arachnoid Cyst | Leptomeningeal Cyst | Rostral sylvian fissure Any site where arachnoid is present | CSF | Arachnoid cells | Thin fibrous membrane | EMA, PR |
| Epidermoid Cyst | - | Cerebellopontine angle Any site (eccentrical) | Flaky, lamellar, "dry-keratin" | Squamous epithelium only (keratohyaline granules) | Thin fibrous membrane | - |
| Dermoid Cyst | - | Midline | "Wet- keratin", greasy material with hair | Squamous epithelium | Thick fibrous capsule containing skin appendages | - |
| Ependymal Cyst | Neuroepithelial cyst, Glioependymal cyst | Cerebral ventricles IV ventricle Paraventricular white matter | Clear | Ependyma-like cells w/wt cilia No basement membrane | Fibrillary glial tissue | S-100, GFAP |
| Enterogenous Cyst | Neurenteric cyst, Bronchogenic (respiratory) cyst | Rostral spinal cord | Clear or mucoid | Columnar epithelium w/wt cilia and goblet cells Metaplasic squamous cells | Fibrous membrane | CK, EMA, CEA |
| Colloid Cyst | - | Anterior III ventricle | Mucoid | Columnar epithelium w/wt cilia and goblet cells | Thin fibrous membrane | CK, EMA, CEA |
| Rathke Cleft Cyst | - | Sellar Suprasellar | Clear | Columnar epithelium w/wt cilia and goblet cells Metaplasic squamous cells | Thin fibrous membrane | CK, EMA, CEA |
| Pineal Cyst | - | Pineal gland | Clear | Gliotic tissue with Rosenthal fibers | Pineal remnants (middle) Fibrous tissue (external) | GFAP, Synaptophysin |
| Choroid Plexus Cyst | - | Lateral ventricles | CSF | Cuboidal choroid plexus cells | Thin fibrous tissue | Transthyretin |

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