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Pulmonary Infections
Moderators: Dr. Dani Zander, Dr. David Hwang and Dr. Osamu Matsubara
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Section 1 -
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Atypical Manifestations of Pulmonary Infections

Carol Farver
Cleveland Clinic
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Introduction
Pulmonary pathologists commonly encounter cases of non-neoplastic lung pathology
with unusual patterns of injury. When infection is suspected clinically, the pathologist is presented
with the task of deciding which organisms can cause these histologic pictures. In general, unusual or
'atypical' infectious patterns of injury are the result of one of two scenarios: 1) Typical patterns of
injury to uncommon (rarely encountered) organisms, or 2) Atypical patterns of injury to common
organisms. Examples of the latter are presented as an overview of this extensive topic.

As will become apparent in these examples, the unusual pathologic patterns usually
arise as a result of defects in the host's lung defenses that either allow an otherwise benign organism
to be a pathogen (the first scenario) or alter the usual host response to a pathogenic organism (the
second scenario). Thus, the status of the host's lung defenses may provide a useful clue to whether or
not an 'atypical' infectious pattern of injury is present.
Atypical Patterns of Common Organisms

Atypical variants of Non-tuberculous Mycobacteria

Chronic Bronchiolitis with Bronchiectasis
Prince et al described this form of MAC disease in 1989 and found it to be restricted to older
non-smoking, HIV (-) Caucasian females. These patients present with an indolent productive cough, few
constitutional symptoms and have no history of underlying lung disease (Prince, 1989). Radiographically,
the appearance is distinct and consists of multiple small nodules (<5 mm) and branching linear
structures combined with bronchiectasis in the same lobe of the lung (Patz, 1995)

The pathology is predominantly that of chronic airway changes consisting of bronchiectasis with a
chronic bronchiolitis, organizing pneumonia and granulomatous inflammation predominantly in the form of
non-necrotizing granulomas and giant cells in the peribronchiolar area. The granulomas and giant cells
consist of mononuclear cells and epithelioid histiocytes and are usually adjacent to areas of lymphocytic
inflammation involving alveolar walls. In larger airways, there is destruction of bronchial cartilage
and smooth muscles layers, ulceration of the bronchial mucosa and development of metaplastic squamous
mucosa in the areas of repair. Also, other features of chronically inflamed airways, such as
neuroendocrine cell hyperplasia and carcinoid tumorlets may be found. Organisms are not abundant and are
rarely found in the sputum of these patients.

Proximal Endobronchial Disease
Isolated endobronchial lesions due to NTM are an unusual manifestation of the disease and can be seen
in both adults and children (Nolt, 1995; Manali, 2005; Asano, 2002). The majority of the cases are due
to MAC and present in the segmental airways in HIV patients as polyps (Kalayian). There is a single case
report of endobronchial disease in an HIV negative adult with a long history of tracheal stenosis due to
distortion of the carina by TB in his youth (Manali, 2005). Recent reports of isolated proximal airway
polyps due to NTM have been reported in children. In those children with endobronchial disease, the
usual clinical presentation was cough and wheezing with the initial clinical diagnosis of foreign body
aspiration or asthma.

Chest x-rays from both the adults and children revealed evidence of air-trapping and the majority had
medastinal adenopathy consistent with involvement by NTM. Bronchoscopic images revealed white polyps
occluding the proximal airways, some reported as fungating and ulcerating.

Microscopic evaluation revealed necrotizing and non-necrotizing granulomas with ulceration and
granulation tissue in the surrounding area. In both adults and children, the most common organisms
cultured were MAC.

Inflammatory Pseudotumor
A marked spindle cell proliferation caused by NTM has been reported in the skin, lymph nodes and bone
marrow. A similar lesion has been reported due to M. tuberculosis in the
lungs (Sekosan, Cleto, et al. 1994). These inflammatory pseudotumors are found in immunocompromised
patients including transplant patients and patients with AIDS (Baron, 1991; Sekosan et al. 1994; Logani
et al. 1999; Umlas et al. 1991). Microscopically, there are whorls of spindle cells mixed with
lymphocytes, plasma cells and dense collagen bands. In some areas the spindle cells can become more
plump, resembling histiocytes, the probable cell of origin (Brandwein et al, 1990). Granulomas are
usually not seen, though poorly-formed granulomata have been reported in lesions involving the skin
(Brandwein et al. 1990). A Ziel-Neelsen stain reveals abundant intracellular acid fast organisms.
 Atypical histologic variants of Pneumocystis jiroveci
In over half the cases of Pneumocystis jiroveci, atypical morphologic features are present (Weber,
1977). These include the following five histologic patterns.

Diffuse alveolar damage
Diffuse alveolar damage with prominent hyaline membranes has been in reported in 9 of 17 cases of
Pneumocystis jiroveci by Askin and Katzenstein (Askin 1981). In this setting, cysts are incorporated in
hyaline membranes, which may make them difficult to see by GMS staining.

Diffuse interstitial fibrosis
Diffuse interstitial fibrosis has been described (Gal 1989), however, this remains a controversial
entity. The pathology is that of a diffuse fibrosis and may represent the fibrotic stages of a DAD from
causes other than P. jiroveci.

Necrotizing Pneumocystis jiroveci
This histologic variant is found predominantly in patients with AIDS. The necrosis usually results
from a dense intra-alveolar and interstitial infiltration of P. jiroveci,
which proceeds to produce necrosis and cavitation (Saldana, 1989; Barrio, 1986). Infiltration of
blood vessels by P. jiroveci may cause occlusion and ischemia and contribute
to the necrosis. Travis et al report that ill-formed granulomas and calcification of the P. jiroveci exudate can be seen in this entity (Travis 1990). Upon healing, this
form of P. jiroveci lung disease may produce thin-walled cysts that are
predisposed toward spontaneous pneumothorax (Liu, 1989).

Granulomatous Pneumocystis jiroveci
A granulomatous response to P. jiroveci infection was increasingly
reported during the 1980's AIDS epidemic. Previously, granulomas associated with this infection were
described as ill-formed aggregates of histiocytes. However, in the AIDS population, the granulomas
became well-formed, with central necrosis, similar to tuberculoid granulomas seen in miliary
mycobacterial or fungal infections. (Cupples, 1989). More recently, this form of Pneumocystis
infections has been seen in a variety of other settings of immunocompromised immunity, including
transplantation (Cruickshank B, 1975), malignancy (Lauffer, 2004), and elderly patients (Travis, 1990).
Unlike the other variants of PJ disease where the organisms are abundant, in this form, the PJ organisms
are usually very sparse in the necrotic centers of the granulomas.
 Atypical Manifestations of Fungal Diseases

Histoplasma
Histoplasmosis capsulatum usually causes disease by inhalation of
airborne spores manifesting as airway-based necrotizing and non-necrotizing granulomas that must be
differentiated from other infectious causes. However, in the immunocompromised host, the response to
this organism produces the following atypical patterns.

Progressive disseminated histoplasmosis with diffuse alveolar damage
This form usually follows massive fungal exposure of a normal person but occurs far more frequently in
immunodeficient hosts. Diffuse alveolar damage with hyaline membrane formation is seen (Garrido, 2006).
Foamy histiocytes in the alveolar spaces contain abundant yeast forms on Gomorri methenamine silver
stain. Yeast forms may also be seen circulating within the alveolar capillaries if significant fungemia
is present. Systemic invasion may result in hepatosplenomegaly, interstitial pneumonitis, and
mediastinal lymphadenopathy.

The most difficult distinction of this form is with Torulopsis glabrata,
and Penicillium marneffei. T. glabrata is of
similar size but is amphophilic and stains entirely with

H & E stains. P. marneffei is also of similar size and shape but it
does not bud though may form short hyphal or "sausage" forms that are up to 20 μ and contain
septae. Capsule-deficient cryptococci may resemble H. capsulatum, however,
should be more pleomorphic, ranging in size from 2 μ to 20 μ and will stain faintly for
mucin by a mucicarmine stain. The amastigotes of Leishmania may be included in the differential if the
patient has traveled to warmer parts of the globe such as Mediterranean , the Orient or Africa .
However, these organisms have dot-like basal bodies or kinetoplasts. Similarly, Toxoplasma gondii may be
confused with H. capsulati, but stain entirely with H&E, do not bud and, like Leishmania, do not
stain with GMS.

Cavitating histoplasmosis
This form usually arises out of a chronic pulmonary histoplasmosis most commonly found in lungs with
underlying chronic lung disease (Gallant, 1996) and in lungs of elderly patients (Loewen, 1960). This
pathology is characterized by extensive, airway-based granulomas involving the entire lung. These
granulomas undergo fibrosis, calcification and, rarely, cavitation (Loewen, 1960). In the largest
series, cavitation is reported in approximately 2% of all cases of histoplasmosis (Connell, 1976) and
approximately 20% of those of chronic pulmonary histoplasmosis (Goodwin, 1976). Upper lobe cavities are
most common (Wheat, 1984, Goodwin, 1976) and many times this disease cannot be distinguished
radiographically from tuberculosis.

The pathology of the cavity shows a histiocytic infiltrate lining a thickened fibrous wall. Toward
the center of the cavity, granular and caseous material is commonly seen containing degenerating
macrophages. These macrophages and those lining the cavity contain multiple histoplasma yeast forms.
Yeast forms may also be present in the extracellular necrosis and some cavities may contain mycelial or
filamentous forms of the fungus, common to the environment but rarely found in the lung.

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